HPN - hepsin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 9 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P05981 HGNC Approved Gene Symbol: HPN 
Ensembl ENSG00000105707 
Synonyms : TMPRSS1
HgncId : HGNC:5155  Omim: 142440 
Refseq: NM_002151 
 
Genomic coordinates: Cytogenetic location: 19q13.11 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HPN Gene Structure

Chromosome: chr19〉e=35533411
Genbank ID: NM_002151 Orientation: +
Length coding sequence : 1251 nucleotides.
Regionstartendregion lengthphase at end
UTR35,533,35635,533,410
Exon35,533,41135,533,426161
Exon35,540,19435,540,2951021
Exon35,540,37935,540,420421
Exon35,550,57735,550,7061302
Exon35,550,77835,550,9001232
Exon35,551,03335,551,073411
Exon35,551,25135,551,4161662
Exon35,551,53135,551,7211911
Exon35,556,15435,556,249961
Exon35,556,44335,556,5851430
Exon35,556,77235,556,9361650
Exon35,557,15335,557,191390
UTR35,557,19235,557,477