HLA-A - major histocompatibility complex, class I, A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 328 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P01891P01892P04439P05534P10314P10316P13746P16188P16189P16190P18462P30443P30447P30450P30453P30455P30456P30457P30459P30512Q09160 HGNC Approved Gene Symbol: HLA-A 
Ensembl ENSG00000206503 
HgncId : HGNC:4931  Omim: 142800 
Refseq: NM_002116  GenBank: D32129 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HLA-A Gene Structure

Chromosome: chr6_GL000256v2_alt〉e=1242448
Genbank ID: NM_002116 Orientation: +
Length coding sequence : 1074 nucleotides.
Regionstartendregion lengthphase at end
UTR1,240,2831,240,367
Exon1,240,3681,240,440731
Exon1,240,5701,240,7942251
Exon1,240,8161,240,839241
Exon1,241,0811,241,3562761
Exon1,241,3591,241,36131
Exon1,241,9601,242,2322731
Exon1,242,3321,242,4481171
Exon1,242,8891,242,921331
Exon1,243,0641,243,111481
Exon1,243,2811,243,28550
UTR1,243,2861,243,714