HERC2 - HECT and RLD domain containing E3 ubiquitin protein ligase 2

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O95714 HGNC Approved Gene Symbol: HERC2 
Ensembl ENSG00000128731 
Synonyms : jdf2, p528, D15F37S1 Previous Names: "hect domain and RLD 2"
HgncId : HGNC:4868  Omim: 605837 
Refseq: NM_004667  GenBank: AF071172 
 
Genomic coordinates: Cytogenetic location: 15q13.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HERC2 Gene Structure

Chromosome: chr15
Genbank ID: NM_004667 Orientation: -
Length coding sequence : 14502 nucleotides.
Regionstartendregion lengthphase at end
UTR28,567,22028,567,298
UTR
28,566,58028,566,610
Exon28,566,50828,566,579720
Exon28,544,54828,544,6621151
Exon28,538,03428,538,1681351
Exon28,525,21428,525,4332202
Exon28,520,05128,520,1511011
Exon28,519,43728,519,5931572
Exon28,518,04028,518,1501112
Exon28,517,36128,517,5321720
Exon28,515,84128,516,0141740
Exon28,514,39428,514,5821890
Exon28,513,61128,513,7621522
Exon28,510,96328,511,1201581
Exon28,510,76428,510,8771141
Exon28,508,06428,508,3152521
Exon28,505,92328,506,1161940
Exon28,502,20728,502,4072010
Exon28,501,23528,501,4632291
Exon28,501,01828,501,1421250
Exon28,499,48628,499,6641792
Exon28,493,69828,493,8821851
Exon28,491,88828,492,0431561
Exon28,491,02728,491,2121861
Exon28,483,74828,483,9181711
Exon28,483,26028,483,3631040
Exon28,482,10928,482,2591511
Exon28,479,21628,479,4302150
Exon28,478,81028,478,9421331
Exon28,478,58028,478,7071280
Exon28,478,29228,478,4871961
Exon28,475,51328,475,6461340
Exon28,474,82028,474,9931740
Exon28,474,60628,474,7421372
Exon28,474,34128,474,4921521
Exon28,473,36428,473,5551921
Exon28,467,17428,467,3611880
Exon28,465,59828,465,7901931
Exon28,463,63528,463,8171831
Exon28,460,76728,460,9481820
Exon28,459,80128,459,9481481
Exon28,459,22228,459,4181970
Exon28,458,88828,459,1182310
Exon28,457,59128,457,7291391
Exon28,456,14828,456,2911441
Exon28,451,38628,451,5281430
Exon28,447,49328,447,7602681
Exon28,447,25928,447,3951370
Exon28,446,60228,446,700990
Exon28,443,74728,443,9151691
Exon28,443,52428,443,6491261
Exon28,441,60728,441,7151092
Exon28,441,36128,441,5001401
Exon28,437,10728,437,2971910
Exon28,436,28528,436,3901061
Exon28,436,11128,436,202920
Exon28,431,72328,431,8981762
Exon28,427,54728,427,6581120
Exon28,424,28828,424,369821
Exon28,424,03328,424,1761441
Exon28,422,56528,422,655912
Exon28,422,09628,422,2731780
Exon28,421,83328,421,914821
Exon28,421,57428,421,7451722
Exon28,420,65828,420,8021450
Exon28,419,54128,419,7662261
Exon28,414,63028,414,8011722
Exon28,413,55328,413,7361840
Exon28,412,83328,412,9731410
Exon28,408,24028,408,4311920
Exon28,397,82328,397,9761541
Exon28,391,38328,391,4901081
Exon28,389,81928,389,9501321
Exon28,389,22328,389,3811591
Exon28,389,01928,389,1371190
Exon28,387,97328,388,0981260
Exon28,387,38428,387,5391560
Exon28,386,87728,386,9921162
Exon28,386,57828,386,7761990
Exon28,380,62428,380,8382152
Exon28,377,79928,377,9761780
Exon28,377,24628,377,4071620
Exon28,375,64928,375,740922
Exon28,375,30928,375,4481401
Exon28,370,15228,370,3391880
Exon28,369,18328,369,3801980
Exon28,366,49228,366,575840
Exon28,362,15928,362,3001421
Exon28,361,81128,362,0051951
Exon28,360,57528,360,6871130
Exon28,359,75828,359,9481912
Exon28,358,71928,358,8241060
Exon28,358,21728,358,4292130
Exon28,356,90928,357,1812730
UTR
28,356,18328,356,908