HDAC2 - histone deacetylase 2

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q92769 HGNC Approved Gene Symbol: HDAC2 
Ensembl ENSG00000196591 
Synonyms : RPD3, YAF1
HgncId : HGNC:4853  Omim: 605164 
GenBank: U31814 
 
Genomic coordinates: Cytogenetic location: 6q21 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC2 Gene Structure

Chromosome: chr6
Genbank ID: NR_073443 Orientation: -
Length coding sequence : 6314 nucleotides.
Regionstartendregion lengthphase at end
UTR
114,291,889114,291,888
Exon114,291,889114,291,88800
UTR
114,291,888114,291,644
Exon114,281,070114,281,1821132
Exon114,279,813114,279,9301180
Exon114,277,783114,277,857750
Exon114,277,177114,277,3151391
Exon114,274,441114,274,5821422
Exon114,270,332114,270,424932
Exon114,270,143114,270,2511090
Exon114,267,172114,267,3121410
Exon114,266,526114,266,6341091
Exon114,265,444114,265,5741310
Exon114,264,515114,264,6701560
Exon114,262,872114,262,929581
Exon114,257,320114,262,25249332