GTF2F2 - general transcription factor IIF subunit 2

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 12 View list of all current human gene IDs
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Cross References
UniProt: P13984 HGNC Approved Gene Symbol: GTF2F2 
Ensembl ENSG00000188342 
Synonyms : TFIIF, BTF4, RAP30 Previous Names: "general transcription factor IIF, polypeptide 1 (74kD subunit)", "general transcription factor IIF, polypeptide 2, 30kDa"
HgncId : HGNC:4653  Omim: 189969 
Refseq: NM_004128  GenBank: X16901 
 
Genomic coordinates: Cytogenetic location: 13q14.12-q14.13 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

GTF2F2 Gene Structure

Chromosome: chr13
Genbank ID: NM_004128 Orientation: +
Length coding sequence : 747 nucleotides.
Regionstartendregion lengthphase at end
UTR45,694,63045,694,790
Exon45,694,79145,694,856660
Exon45,710,86845,710,941742
Exon45,723,90545,723,923190
Exon45,725,82245,725,9661451
Exon45,781,55945,781,640822
Exon45,827,00645,827,1051000
Exon45,841,36845,841,5111440
Exon45,857,57745,857,6961200
UTR45,857,69745,858,239