GRIN1 - glutamate ionotropic receptor NMDA type subunit 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 16 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q05586 HGNC Approved Gene Symbol: GRIN1 
Previous Symbols: NMDAR1 Ensembl ENSG00000176884 
Synonyms : GluN1 Previous Names: "N-methyl-D-aspartate receptor subunit NR1", "glutamate receptor, ionotropic, N-methyl D-aspartate 1"
HgncId : HGNC:4584  Omim: 138249 
Refseq: NM_007327 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

GRIN1 Gene Structure

Chromosome: chr9
Genbank ID: NM_007327 Orientation: +
Length coding sequence : 2814 nucleotides.
Regionstartendregion lengthphase at end
UTR140,033,608140,033,938
Exon140,033,939140,034,1962580
Exon140,036,465140,036,5991350
Exon140,040,178140,040,3541770
Exon140,043,461140,043,5611012
Exon140,051,121140,051,2421221
Exon140,051,315140,051,4891752
Exon140,052,831140,052,9751450
Exon140,053,073140,053,156840
Exon140,055,508140,055,6491421
Exon140,055,741140,055,8681280
Exon140,056,376140,056,5401650
Exon140,056,624140,056,7421192
Exon140,056,856140,056,9681131
Exon140,057,043140,057,1911490
Exon140,057,298140,057,4551582
Exon140,057,621140,057,7821622
Exon140,058,011140,058,1201101
Exon140,058,211140,058,3561460
Exon140,059,638140,059,7481110
Exon140,061,863140,061,9791170
UTR140,061,980140,063,214