GPHN - gephyrin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9NQX3 HGNC Approved Gene Symbol: GPHN 
Ensembl ENSG00000171723 
Synonyms : KIAA1385
HgncId : HGNC:15465  Omim: 603930 
Refseq: NM_020806  GenBank: AB037806 
 
Genomic coordinates: Cytogenetic location: 14q23.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

GPHN Gene Structure

Chromosome: chr14
Genbank ID: NM_020806 Orientation: +
Length coding sequence : 2307 nucleotides.
Regionstartendregion lengthphase at end
UTR66,974,12466,975,245
Exon66,975,24666,975,309641
Exon67,147,82567,147,903792
Exon67,243,18267,243,239580
Exon67,291,19267,291,284930
Exon67,346,65767,346,751952
Exon67,382,72067,382,786670
Exon67,389,38367,389,6552730
Exon67,390,91167,391,009990
Exon67,431,90867,432,0421350
Exon67,490,35067,490,392431
Exon67,525,36667,525,5031381
Exon67,555,70067,555,792931
Exon67,567,57367,567,628560
Exon67,576,85767,576,9761200
Exon67,578,57867,578,636592
Exon67,579,73567,579,8881540
Exon67,588,97367,589,0941222
Exon67,610,07967,610,166880
Exon67,626,13267,626,205742
Exon67,631,87967,631,943651
Exon67,635,65067,635,7531040
Exon67,646,29567,646,391971
Exon67,647,52167,647,6541340
UTR67,647,65567,648,525