GOT1 - glutamic-oxaloacetic transaminase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 5 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P17174 HGNC Approved Gene Symbol: GOT1 
Ensembl ENSG00000120053 
Synonyms : AST1 Previous Names: "glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)", "glutamic-oxaloacetic transaminase 1, soluble"
HgncId : HGNC:4432  Omim: 138180 
Refseq: NM_002079  GenBank: M37400 
 
Genomic coordinates: Cytogenetic location: 10q24.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

GOT1 Gene Structure

Chromosome: chr10
Genbank ID: NM_002079 Orientation: -
Length coding sequence : 1239 nucleotides.
Regionstartendregion lengthphase at end
UTR
101,190,323101,190,530
Exon101,190,205101,190,3221181
Exon101,180,381101,180,5621820
Exon101,166,483101,166,6061241
Exon101,165,894101,166,0061130
Exon101,165,513101,165,6171050
Exon101,163,481101,163,6311511
Exon101,163,226101,163,3911662
Exon101,162,337101,162,4791431
Exon101,157,304101,157,4431400
UTR
101,156,627101,157,303