FMR1 - fragile X mental retardation 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for FMR1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q06787 HGNC Approved Gene Symbol: FMR1 
Previous Symbols: POF1, POF Ensembl ENSG00000102081 
Synonyms : FMRP, FRAXA, MGC87458 Previous Names: "premature ovarian failure 1"
HgncId : HGNC:3775  Omim: 309550 
Refseq: NM_002024  GenBank: X69962 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

FMR1 Gene Structure

Chromosome: chrX
Genbank ID: NM_002024 Orientation: +
Length coding sequence : 1896 nucleotides.
Regionstartendregion lengthphase at end
UTR147,911,950147,912,179
Exon147,912,180147,912,230510
Exon147,921,933147,921,985532
Exon147,925,540147,925,633940
Exon147,928,322147,928,393720
Exon147,928,659147,928,8071492
Exon147,929,948147,930,041940
Exon147,930,128147,930,2441170
Exon147,932,425147,932,5951710
Exon147,932,685147,932,763791
Exon147,936,504147,936,6131100
Exon147,937,466147,937,6001350
Exon147,938,099147,938,161630
Exon147,940,576147,940,662870
Exon147,943,131147,943,3261961
Exon147,944,869147,945,0511831
Exon147,945,534147,945,616830
Exon147,948,683147,948,8441620
UTR147,948,845147,951,127