FAF1 - Fas associated factor 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 10 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UNN5 HGNC Approved Gene Symbol: FAF1 
Ensembl ENSG00000185104 
Synonyms : CGI-03, hFAF1, HFAF1s, UBXD12, UBXN3A Previous Names: "Fas (TNFRSF6) associated factor 1"
HgncId : HGNC:3578  Omim: 604460 
Refseq: NM_007051  GenBank: AF132938 
 
Genomic coordinates: Cytogenetic location: 1p32.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

FAF1 Gene Structure

Chromosome: chr1
Genbank ID: NM_007051 Orientation: -
Length coding sequence : 1950 nucleotides.
Regionstartendregion lengthphase at end
UTR
51,425,48451,425,936
Exon51,425,43951,425,483450
Exon51,323,60151,323,669690
Exon51,267,30351,267,349472
Exon51,253,67251,253,8772061
Exon51,210,35651,210,447920
Exon51,204,53551,204,626922
Exon51,171,45851,171,5631060
Exon51,121,11451,121,200870
Exon51,061,79351,061,888960
Exon51,050,35751,050,4831271
Exon51,049,32451,049,387642
Exon51,048,29051,048,371820
Exon51,032,74951,032,9031552
Exon51,005,26451,005,4001371
Exon51,001,04151,001,129890
Exon50,957,39350,957,473810
Exon50,956,26050,956,337780
Exon50,941,13650,941,3512160
Exon50,907,11250,907,195840
UTR
50,906,93550,907,111