EXOSC10 - exosome component 10

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q01780 HGNC Approved Gene Symbol: EXOSC10 
Previous Symbols: PMSCL2 Ensembl ENSG00000171824 
Synonyms : PM-Scl, PM/Scl-100, Rrp6p, RRP6, p2, p3, p4 Previous Names: "polymyositis/scleroderma autoantigen 2, 100kDa"
HgncId : HGNC:9138  Omim: 605960 
Refseq: NM_001001998  GenBank: BC073788 
 
Genomic coordinates: Cytogenetic location: 1p36.22 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

EXOSC10 Gene Structure

Chromosome: chr1
Genbank ID: NM_001001998 Orientation: -
Length coding sequence : 2655 nucleotides.
Regionstartendregion lengthphase at end
UTR
11,159,88911,159,967
Exon11,159,77811,159,8881110
Exon11,158,07711,158,2131372
Exon11,155,81511,155,9381240
Exon11,151,55011,151,6541050
Exon11,151,07111,151,2361661
Exon11,150,61111,150,7251152
Exon11,148,18011,148,255760
Exon11,147,85711,147,9671110
Exon11,147,50511,147,6481440
Exon11,142,74511,142,9351912
Exon11,141,13911,141,2951570
Exon11,140,82111,140,9691492
Exon11,140,55611,140,606512
Exon11,139,76811,139,8791120
Exon11,137,65811,137,708510
Exon11,137,42211,137,500791
Exon11,136,89911,137,0051070
Exon11,134,28811,134,383960
Exon11,133,99111,134,065750
Exon11,132,14411,132,228851
Exon11,130,95711,131,030740
Exon11,129,61611,129,7871721
Exon11,128,70211,128,763620
Exon11,128,06511,128,141772
Exon11,126,77511,126,805310
UTR
11,126,67011,126,774