EGLN1 - egl-9 family hypoxia inducible factor 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 33 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9GZT9 HGNC Approved Gene Symbol: EGLN1 
Previous Symbols: C1orf12 Ensembl ENSG00000135766 
Synonyms : SM-20, PHD2, ZMYND6, HIFPH2 Previous Names: "EGL nine (C.elegans) homolog 1", "egl nine homolog 1 (C. elegans)", "egl-9 family hypoxia-inducible factor 1"
HgncId : HGNC:1232  Omim: 606425 
Refseq: NM_022051  GenBank: AJ310543 
 
Genomic coordinates: Cytogenetic location: 1q42.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

EGLN1 Gene Structure

Chromosome: chr1
Genbank ID: NM_022051 Orientation: -
Length coding sequence : 1278 nucleotides.
Regionstartendregion lengthphase at end
UTR
231,557,635231,560,790
Exon231,556,744231,557,6348910
Exon231,509,726231,509,8451200
Exon231,506,308231,506,4441372
Exon231,503,315231,503,382681
Exon231,502,157231,502,221650
UTR
231,499,497231,502,156