DNMT1 - DNA methyltransferase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 9 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P26358 HGNC Approved Gene Symbol: DNMT1 
Previous Symbols: DNMT Ensembl ENSG00000130816 
Synonyms : MCMT, CXXC9 Previous Names: "DNA (cytosine-5-)-methyltransferase 1"
HgncId : HGNC:2976  Omim: 126375 
Refseq: NM_001379  GenBank: X63692 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DNMT1 Gene Structure

Chromosome: chr19
Genbank ID: NM_001379 Orientation: -
Length coding sequence : 4848 nucleotides.
Regionstartendregion lengthphase at end
UTR
10,305,57610,305,811
Exon10,305,49610,305,575802
Exon10,292,71710,292,753370
Exon10,291,45410,291,5611080
Exon10,291,02610,291,2452201
Exon10,287,96810,288,043762
Exon10,286,21610,286,294790
Exon10,284,54710,284,581352
Exon10,283,76610,283,850850
Exon10,279,00610,279,040352
Exon10,277,27410,277,361880
Exon10,274,00210,274,036352
Exon10,273,34310,273,424820
Exon10,271,06010,271,094352
Exon10,270,69410,270,739460
Exon10,270,51810,270,598810
Exon10,270,33410,270,4431102
Exon10,267,06710,267,1851191
Exon10,266,52910,266,621931
Exon10,265,58110,265,7321520
Exon10,265,26210,265,4491882
Exon10,264,96910,265,1551870
Exon10,262,42610,262,523982
Exon10,262,07410,262,2211480
Exon10,260,52910,260,6441162
Exon10,260,12910,260,3332050
Exon10,259,56010,259,6931342
Exon10,257,02710,257,2001742
Exon10,254,44210,254,6632222
Exon10,252,70410,252,8961930
Exon10,251,78110,251,865851
Exon10,251,45710,251,5851291
Exon10,250,72210,251,0042832
Exon10,250,35210,250,4931420
Exon10,249,11510,249,2811672
Exon10,248,50810,248,6851780
Exon10,247,76110,247,9561961
Exon10,246,79710,246,9631670
Exon10,246,41210,246,5281170
Exon10,244,89310,244,983911
Exon10,244,34310,244,377350
UTR
10,244,02010,244,342