DMD - dystrophin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P11532 HGNC Approved Gene Symbol: DMD 
Previous Symbols: MRX85 Ensembl ENSG00000198947 
Synonyms : BMD, DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272 Previous Names: "dystrophin (muscular dystrophy, Duchenne and Becker types), includes DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272", "mental retardation, X-linked 85"
HgncId : HGNC:2928  Omim: 300377 
Refseq: NM_004006  GenBank: AF047505 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DMD Gene Structure

Chromosome: chrX
Genbank ID: NM_004006 Orientation: -
Length coding sequence : 11055 nucleotides.
Regionstartendregion lengthphase at end
UTR
33,229,43033,229,673
Exon33,229,39933,229,429311
Exon33,038,25633,038,317620
Exon32,867,84532,867,937930
Exon32,862,90032,862,977780
Exon32,841,41232,841,504930
Exon32,834,58532,834,7571732
Exon32,827,61032,827,7281191
Exon32,717,22932,717,4101820
Exon32,715,98732,716,1151290
Exon32,663,08132,663,2691890
Exon32,662,24932,662,4301822
Exon32,632,42032,632,5701510
Exon32,613,87432,613,9931200
Exon32,591,86232,591,9631020
Exon32,591,64732,591,7541080
Exon32,583,81932,583,9981800
Exon32,563,27632,563,4511762
Exon32,536,12532,536,2481240
Exon32,519,87232,519,959881
Exon32,509,39432,509,6352420
Exon32,503,03632,503,2161811
Exon32,490,28132,490,4261460
Exon32,486,61532,486,8272130
Exon32,482,70332,482,8161140
Exon32,481,55632,481,7111560
Exon32,472,77932,472,9491710
Exon32,466,57332,466,7551830
Exon32,459,29732,459,4311350
Exon32,456,35832,456,5071500
Exon32,429,86932,430,0301620
Exon32,408,18832,408,2981110
Exon32,407,61832,407,7911740
Exon32,404,42732,404,5821560
Exon32,398,62732,398,7971710
Exon32,383,13732,383,3161800
Exon32,382,69932,382,8271290
Exon32,380,90532,381,0751710
Exon32,366,52332,366,6451230
Exon32,364,06032,364,1971380
Exon32,361,25132,361,4031530
Exon32,360,21732,360,3991830
Exon32,328,19932,328,3931950
Exon32,305,64632,305,8181732
Exon32,235,03332,235,1801480
Exon31,986,45631,986,6311762
Exon31,950,19731,950,3441480
Exon31,947,71331,947,8621500
Exon31,893,30831,893,4901830
Exon31,854,83531,854,9391050
Exon31,838,09231,838,2001091
Exon31,792,07731,792,3092330
Exon31,747,74831,747,8651181
Exon31,697,49231,697,7032120
Exon31,676,10731,676,2611552
Exon31,645,79031,645,9791900
Exon31,525,39831,525,5701732
Exon31,514,90531,515,0611570
Exon31,497,10031,497,2201211
Exon31,496,22331,496,4912690
Exon31,462,59831,462,7441470
Exon31,366,67331,366,751791
Exon31,341,71531,341,775612
Exon31,279,07231,279,133621
Exon31,241,16431,241,238751
Exon31,227,61531,227,8162022
Exon31,224,69931,224,784861
Exon31,222,07831,222,2351580
Exon31,200,85531,201,0211672
Exon31,198,48731,198,5981120
Exon31,196,78631,196,9221372
Exon31,196,04931,196,087392
Exon31,191,65631,191,721662
Exon31,190,46531,190,530662
Exon31,187,56031,187,7181592
Exon31,165,39231,165,6352440
Exon31,164,40831,164,5311241
Exon31,152,21931,152,311931
Exon31,144,75931,144,790320
Exon31,140,03631,140,047120
UTR
31,137,34531,140,035