DDX23 - DEAD-box helicase 23

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 5 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9BUQ8 HGNC Approved Gene Symbol: DDX23 
Ensembl ENSG00000174243 
Synonyms : prp28, U5-100K, PRPF28, SNRNP100 Previous Names: "PRP28 homolog, yeast", "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
HgncId : HGNC:17347  Omim: 612172 
Refseq: NM_004818  GenBank: AF026402 
 
Genomic coordinates: Cytogenetic location: 12q13.12 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DDX23 Gene Structure

Chromosome: chr12
Genbank ID: NM_004818 Orientation: -
Length coding sequence : 2460 nucleotides.
Regionstartendregion lengthphase at end
UTR49,245,86649,245,957
UTR
49,239,56649,239,565
Exon49,239,35749,239,5652092
Exon49,237,72349,237,8331112
Exon49,233,79649,233,889940
Exon49,233,62749,233,692660
Exon49,231,72549,231,8631391
Exon49,231,30749,231,4401340
Exon49,231,06449,231,1761132
Exon49,230,67749,230,8201442
Exon49,230,35249,230,5772260
Exon49,229,90449,230,0491462
Exon49,228,10349,228,2801780
Exon49,227,06049,227,3022430
Exon49,226,20549,226,3561522
Exon49,225,86149,225,9691090
Exon49,224,92549,225,0991751
Exon49,224,25249,224,4752240
UTR
49,223,53949,224,251