DDR1 - discoidin domain receptor tyrosine kinase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 21 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q08345 HGNC Approved Gene Symbol: DDR1 
Previous Symbols: NTRK4, PTK3A, NEP, CAK, EDDR1 Ensembl ENSG00000204580 
Synonyms : RTK6, CD167 Previous Names: "discoidin domain receptor family, member 1"
HgncId : HGNC:2730  Omim: 600408 
Refseq: NM_013994  GenBank: X99031 
 
Genomic coordinates: Cytogenetic location: 6p21.33 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DDR1 Gene Structure

Chromosome: chr6_qbl_hap6
Genbank ID: NM_013994 Orientation: +
Length coding sequence : 2757 nucleotides.
Regionstartendregion lengthphase at end
UTR2,149,4512,149,493
Exon2,149,4942,149,578851
Exon2,149,6722,149,7741032
Exon2,149,9662,150,1942290
Exon2,151,7372,151,8841481
Exon2,152,1442,152,2431002
Exon2,152,7682,152,9541870
Exon2,153,0622,153,3082471
Exon2,153,8342,153,929961
Exon2,154,0382,154,1891520
Exon2,155,2722,155,4371661
Exon2,156,1702,156,2801111
Exon2,157,3872,157,6312450
Exon2,157,7802,157,9071282
Exon2,158,1272,158,3632372
Exon2,158,8392,159,0732350
Exon2,159,6542,159,8031500
Exon2,159,9222,160,0621410
UTR2,160,0632,160,922