DCLRE1A - DNA cross-link repair 1A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 312 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q6PJP8 HGNC Approved Gene Symbol: DCLRE1A 
Ensembl ENSG00000198924 
Synonyms : SNM1, PSO2, KIAA0086, hSNM1 Previous Names: "DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)"
HgncId : HGNC:17660  Omim: 609682 
Refseq: NM_014881 
 
Genomic coordinates: Cytogenetic location: 10q25.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DCLRE1A Gene Structure

Chromosome: chr10
Genbank ID: NM_014881 Orientation: -
Length coding sequence : 3120 nucleotides.
Regionstartendregion lengthphase at end
UTR
115,612,942115,613,975
Exon115,612,482115,612,9414601
Exon115,608,739115,610,40316651
Exon115,606,961115,607,0941340
Exon115,605,444115,605,5621192
Exon115,603,863115,604,0031412
Exon115,602,102115,602,2471461
Exon115,601,165115,601,3191550
Exon115,596,821115,596,9621421
Exon115,594,911115,595,0711610
UTR
115,594,483115,594,910