CTR9 - CTR9 homolog, Paf1/RNA polymerase II complex component

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 2 View list of all current human gene IDs
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Cross References
UniProt: Q6PD62 HGNC Approved Gene Symbol: CTR9 
Previous Symbols: SH2BP1 Ensembl ENSG00000198730 
Synonyms : KIAA0155, TSBP, p150TSP Previous Names: "SH2 domain binding protein 1 (tetratricopeptide repeat containing)", "Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)"
HgncId : HGNC:16850  Omim: 609366 
Refseq: NM_014633  GenBank: D63875 
 
Genomic coordinates: Cytogenetic location: 11p15.4 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CTR9 Gene Structure

Chromosome: chr11
Genbank ID: NM_014633 Orientation: +
Length coding sequence : 3519 nucleotides.
Regionstartendregion lengthphase at end
UTR10,772,53310,772,959
Exon10,772,96010,773,004450
Exon10,774,21910,774,317990
Exon10,776,50510,776,7442400
Exon10,777,22510,777,3421181
Exon10,778,29610,778,385901
Exon10,781,72010,781,8681490
Exon10,783,49410,783,6011080
Exon10,784,97810,785,0851080
Exon10,785,19010,785,4262370
Exon10,785,65910,785,748900
Exon10,785,85510,785,9831290
Exon10,786,09510,786,2781841
Exon10,787,94910,788,037890
Exon10,789,35310,789,5381860
Exon10,789,62110,789,708881
Exon10,789,89010,790,0381490
Exon10,791,75710,791,8731170
Exon10,792,03410,792,1791462
Exon10,793,09210,793,163722
Exon10,794,06710,794,2021360
Exon10,794,67410,794,8201470
Exon10,795,55910,795,7161582
Exon10,796,75410,796,850970
Exon10,797,06810,797,1801132
Exon10,800,22610,800,6524270
UTR10,800,65310,801,302