CPSF6 - cleavage and polyadenylation specific factor 6

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 10 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q16630 HGNC Approved Gene Symbol: CPSF6 
Ensembl ENSG00000111605 
Synonyms : CFIM, HPBRII-4, HPBRII-7, CFIM68, CFIM72 Previous Names: "cleavage and polyadenylation specific factor 6, 68kD subunit", "cleavage and polyadenylation specific factor 6, 68kDa"
HgncId : HGNC:13871  Omim: 604979 
Refseq: NM_007007  GenBank: X67336 
 
Genomic coordinates: Cytogenetic location: 12q15 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CPSF6 Gene Structure

Chromosome: chr12
Genbank ID: NM_007007 Orientation: +
Length coding sequence : 1653 nucleotides.
Regionstartendregion lengthphase at end
UTR69,633,31669,633,426
Exon69,633,42769,633,486600
Exon69,644,90969,645,1182100
Exon69,646,83169,646,9341042
Exon69,650,47769,650,6221461
Exon69,651,51269,651,6851741
Exon69,652,37069,652,8745052
Exon69,653,20869,653,3231161
Exon69,653,82469,653,9771542
Exon69,656,15369,656,3391870
UTR69,656,34069,656,342