COL26A1 - collagen type XXVI alpha 1 chain

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q96A83 HGNC Approved Gene Symbol: COL26A1 
Previous Symbols: EMID2 Ensembl ENSG00000160963 
Synonyms : Emu2, EMI6 Previous Names: "EMI domain containing 2", "collagen, type XXVI, alpha 1"
HgncId : HGNC:18038  Omim: 608927 
Refseq: NM_133457  GenBank: AJ416091 
 
Genomic coordinates: Cytogenetic location: 7q22.1 reset view
Currently highlighted: Genomic position: chr7:101,176,424 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

COL26A1 Gene Structure

Chromosome: chr7
Genbank ID: NM_133457 Orientation: +
Length coding sequence : 1316 nucleotides.
Regionstartendregion lengthphase at end
UTR101,006,100101,006,313
Exon101,006,314101,006,4711582
Exon101,063,258101,063,3801232
Exon101,090,971101,091,068981
Exon101,176,363101,176,424620
Exon101,183,174101,183,3301571
Exon101,187,279101,187,377991
Exon101,188,619101,188,7711531
Exon101,190,437101,190,520841
Exon101,192,452101,192,504530
Exon101,194,389101,194,424360
Exon101,196,607101,196,657510
Exon101,199,068101,199,152851
Exon101,200,651101,200,669192
Exon101,200,670101,200,8101412
UTR101,200,811101,202,304