CHMP1A - charged multivesicular body protein 1A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9HD42 HGNC Approved Gene Symbol: CHMP1A 
Previous Symbols: PRSM1, PCOLN3 Ensembl ENSG00000131165 
Synonyms : KIAA0047, CHMP1, Vps46A Previous Names: "procollagen (type III) N-endopeptidase", "chromatin modifying protein 1A"
HgncId : HGNC:8740  Omim: 164010 
Refseq: NM_002768  GenBank: U58048 
 
Genomic coordinates: Cytogenetic location: 16q24.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CHMP1A Gene Structure

Chromosome: chr16
Genbank ID: NM_002768 Orientation: -
Length coding sequence : 588 nucleotides.
Regionstartendregion lengthphase at end
UTR
89,723,99789,724,193
Exon89,723,99089,723,99671
Exon89,720,31289,720,331200
Exon89,717,97789,718,054780
Exon89,715,75989,715,9051470
Exon89,713,61189,713,7391290
Exon89,712,93589,713,1221882
Exon89,712,47489,712,495220
UTR
89,710,83989,712,473