CHIT1 - chitinase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 19 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q13231 HGNC Approved Gene Symbol: CHIT1 
Ensembl ENSG00000133063 
Synonyms : CHIT, CHI3 Previous Names: "chitinase 1 (chitotriosidase)"
HgncId : HGNC:1936  Omim: 600031 
Refseq: NM_003465  GenBank: U29615 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CHIT1 Gene Structure

Chromosome: chr1
Genbank ID: NM_003465 Orientation: -
Length coding sequence : 1398 nucleotides.
Regionstartendregion lengthphase at end
UTR
203,198,765203,198,860
Exon203,198,740203,198,764251
Exon203,197,661203,197,690301
Exon203,194,797203,194,9982022
Exon203,194,176203,194,232572
Exon203,192,623203,192,7881660
Exon203,192,263203,192,3871252
Exon203,191,330203,191,4531240
Exon203,188,792203,188,9771860
Exon203,188,344203,188,4571140
Exon203,186,867203,186,9931271
Exon203,186,017203,186,2612450
UTR
203,185,207203,186,016