CHD1 - chromodomain helicase DNA binding protein 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 15 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O14646 HGNC Approved Gene Symbol: CHD1 
Ensembl ENSG00000153922 
HgncId : HGNC:1915  Omim: 602118 
Refseq: NM_001270  GenBank: AF006513 
 
Genomic coordinates: Cytogenetic location: 5q15-q21.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CHD1 Gene Structure

Chromosome: chr5
Genbank ID: NM_001270 Orientation: -
Length coding sequence : 5130 nucleotides.
Regionstartendregion lengthphase at end
UTR
98,262,09198,262,238
Exon98,262,03898,262,090532
Exon98,240,60198,240,8022020
Exon98,239,49698,239,6121170
Exon98,238,60498,238,668652
Exon98,236,89098,237,0391502
Exon98,236,51598,236,7862721
Exon98,235,18498,235,4092262
Exon98,234,36898,234,4681011
Exon98,233,96098,234,1381790
Exon98,232,89798,233,0241282
Exon98,231,93098,232,1462170
Exon98,230,30198,230,390900
Exon98,229,12098,229,3101912
Exon98,228,22998,228,4171892
Exon98,224,78098,224,9421630
Exon98,223,79298,223,9441530
Exon98,221,28298,221,353720
Exon98,218,79298,218,9411500
Exon98,217,67998,217,8271492
Exon98,216,98398,217,079970
Exon98,216,78098,216,875960
Exon98,215,25698,215,4321770
Exon98,212,10298,212,2621612
Exon98,210,77698,210,817422
Exon98,209,29798,209,4271311
Exon98,208,12198,208,2591392
Exon98,207,75598,207,9051510
Exon98,206,39198,206,5071170
Exon98,205,45898,205,5861290
Exon98,204,19998,204,3391410
Exon98,199,11298,199,2901792
Exon98,195,67698,195,772970
Exon98,194,66898,194,719521
Exon98,193,88498,194,0942112
Exon98,192,08498,192,4293460
UTR
98,190,90898,192,083