CDH3 - cadherin 3

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 14 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P22223 HGNC Approved Gene Symbol: CDH3 
Ensembl ENSG00000062038 
Synonyms : CDHP, PCAD Previous Names: "cadherin 3, P-cadherin (placental)", "cadherin 3, type 1, P-cadherin (placental)"
HgncId : HGNC:1762  Omim: 114021 
Refseq: NM_001793  GenBank: X63629 
 
Genomic coordinates: Cytogenetic location: 16q22.1 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CDH3 Gene Structure

Chromosome: chr16
Genbank ID: NM_001793 Orientation: +
Length coding sequence : 2487 nucleotides.
Regionstartendregion lengthphase at end
UTR68,678,73868,679,282
Exon68,679,28368,679,327450
Exon68,679,53968,679,6531151
Exon68,710,28868,710,373860
Exon68,712,03768,712,1801440
Exon68,712,40468,712,5591560
Exon68,712,66568,712,8091451
Exon68,713,70268,713,8771760
Exon68,714,87168,714,9991290
Exon68,716,20568,716,3901860
Exon68,718,48668,718,7272422
Exon68,719,10868,719,2531461
Exon68,721,41568,721,6392251
Exon68,725,62368,725,8292071
Exon68,729,15868,729,2881310
Exon68,729,68068,729,8261470
Exon68,732,09468,732,3032100
UTR68,732,30468,732,970