CDC16 - cell division cycle 16

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 12 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q13042 HGNC Approved Gene Symbol: CDC16 
Ensembl ENSG00000130177 
Synonyms : APC6, ANAPC6, CUT9 Previous Names: "CDC16 (cell division cycle 16, S. cerevisiae, homolog)", "CDC16 cell division cycle 16 homolog (S. cerevisiae)", "cell division cycle 16 homolog (S. cerevisiae)"
HgncId : HGNC:1720  Omim: 603461 
Refseq: NM_003903  GenBank: U18291 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CDC16 Gene Structure

Chromosome: chr13
Genbank ID: NM_003903 Orientation: +
Length coding sequence : 1860 nucleotides.
Regionstartendregion lengthphase at end
UTR115,000,361115,000,559
Exon115,000,560115,000,607480
Exon115,002,120115,002,174551
Exon115,002,274115,002,371980
Exon115,004,465115,004,503390
Exon115,004,825115,004,9651410
Exon115,007,596115,007,7551601
Exon115,008,732115,008,823920
Exon115,009,331115,009,4641342
Exon115,010,365115,010,444801
Exon115,011,475115,011,524500
Exon115,012,406115,012,479742
Exon115,016,024115,016,1491262
Exon115,022,553115,022,7051532
Exon115,024,810115,024,873640
Exon115,027,362115,027,423622
Exon115,028,354115,028,4891360
Exon115,030,625115,030,715911
Exon115,037,659115,037,9182600
UTR115,037,919115,037,956