CD47 - CD47 molecule

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 9 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q08722 HGNC Approved Gene Symbol: CD47 
Previous Symbols: MER6 Ensembl ENSG00000196776 
Synonyms : IAP, OA3 Previous Names: "CD47 antigen (Rh-related antigen, integrin-associated signal transducer)"
HgncId : HGNC:1682  Omim: 601028 
Refseq: NM_001777 
 
Genomic coordinates: Cytogenetic location: 3q13.12 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CD47 Gene Structure

Chromosome: chr3
Genbank ID: NM_001777 Orientation: -
Length coding sequence : 969 nucleotides.
Regionstartendregion lengthphase at end
UTR
107,809,756107,809,935
Exon107,809,710107,809,755461
Exon107,798,838107,799,1913541
Exon107,789,940107,790,029901
Exon107,779,592107,779,6991081
Exon107,778,299107,778,391931
Exon107,777,184107,777,276931
Exon107,776,324107,776,416931
Exon107,770,786107,770,817320
Exon107,769,425107,769,449251
Exon107,768,466107,768,498331
Exon107,766,135107,766,13950
UTR
107,761,941107,766,134