CCNT1 - cyclin T1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 24 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O60563 HGNC Approved Gene Symbol: CCNT1 
Previous Symbols: HIVE1 Ensembl ENSG00000129315 
Synonyms : CCNT, CYCT1 Previous Names: "human immunodeficiency virus type 1 (HIV-1) expression (elevated) 1"
HgncId : HGNC:1599  Omim: 143055 
Refseq: NM_001240  GenBank: AF048730 
 
Genomic coordinates: Cytogenetic location: 12q13.11-q13.12 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CCNT1 Gene Structure

Chromosome: chr12
Genbank ID: NM_001240 Orientation: -
Length coding sequence : 2178 nucleotides.
Regionstartendregion lengthphase at end
UTR
49,110,45949,110,781
Exon49,110,29849,110,4581612
Exon49,108,22649,108,307820
Exon49,099,55149,099,6791290
Exon49,094,79649,094,856611
Exon49,093,56149,093,623631
Exon49,091,92149,091,966462
Exon49,089,78249,089,9451641
Exon49,089,54249,089,612710
Exon49,086,81649,088,21914040
UTR
49,082,24149,086,815