CCL5 - C-C motif chemokine ligand 5

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 18 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P13501 HGNC Approved Gene Symbol: CCL5 
Previous Symbols: D17S136E, SCYA5 Ensembl ENSG00000271503 
Synonyms : RANTES, SISd, TCP228, MGC17164 Previous Names: "small inducible cytokine A5 (RANTES)", "chemokine (C-C motif) ligand 5"
HgncId : HGNC:10632  Omim: 187011 
Refseq: NM_002985  GenBank: AF043341 
 
Genomic coordinates: Cytogenetic location: 17q12 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CCL5 Gene Structure

Chromosome: chr17
Genbank ID: NM_002985 Orientation: -
Length coding sequence : 273 nucleotides.
Regionstartendregion lengthphase at end
UTR
34,207,31034,207,377
Exon34,207,23434,207,309761
Exon34,205,53234,205,6431122
Exon34,199,38134,199,468880
UTR
34,198,49634,199,380