CASP9 - caspase 9

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 10 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P55211  HGNC Approved Gene Symbol: CASP9 
Ensembl ENSG00000132906 
Synonyms : MCH6, ICE-LAP6, APAF-3, PPP1R56 Previous Names: "caspase 9, apoptosis-related cysteine protease", "caspase 9, apoptosis-related cysteine peptidase"
HgncId : HGNC:1511  Omim: 602234 
Refseq: NM_032996  GenBank: U60521 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CASP9 Gene Structure

Chromosome: chr1
Genbank ID: NM_032996 Orientation: -
Length coding sequence : 999 nucleotides.
Regionstartendregion lengthphase at end
UTR15,851,07715,851,285
UTR
15,844,77415,844,890
Exon15,844,60515,844,7731691
Exon15,834,36815,834,402350
Exon15,833,39415,833,5701770
Exon15,832,48515,832,574900
Exon15,831,10615,831,2531481
Exon15,821,76815,821,9471801
Exon15,820,38715,820,4961100
Exon15,819,43815,819,530930
UTR
15,817,89615,819,437