CAPNS1 - calpain small subunit 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P04632 HGNC Approved Gene Symbol: CAPNS1 
Previous Symbols: CAPN4 Ensembl ENSG00000126247 
Synonyms : CANP, CANPS, 30K, CDPS
HgncId : HGNC:1481  Omim: 114170 
GenBank: X04106 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CAPNS1 Gene Structure

Chromosome: chr19
Genbank ID: NM_001003962 Orientation: +
Length coding sequence : 804 nucleotides.
Regionstartendregion lengthphase at end
UTR36,631,90136,631,913
Exon36,631,91436,632,1222092
Exon36,633,20236,633,235340
Exon36,633,55436,633,643900
Exon36,633,81136,633,868581
Exon36,633,96636,634,030650
Exon36,636,70836,636,776690
Exon36,636,87836,636,956791
Exon36,637,09836,637,2141171
Exon36,640,48036,640,538590
Exon36,640,71536,640,741270
UTR36,640,74236,641,255