C5 - complement C5

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 25 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P01031 HGNC Approved Gene Symbol: C5 
Ensembl ENSG00000106804 
Synonyms : CPAMD4, C5a, C5b Previous Names: "complement component 5"
HgncId : HGNC:1331  Omim: 120900 
Refseq: NM_001735  GenBank: M57729 
 
Genomic coordinates: Cytogenetic location: 9q33.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

C5 Gene Structure

Chromosome: chr9
Genbank ID: NM_001735 Orientation: -
Length coding sequence : 5028 nucleotides.
Regionstartendregion lengthphase at end
UTR
123,812,525123,812,554
Exon123,812,460123,812,524652
Exon123,808,469123,808,6611930
Exon123,805,282123,805,4441631
Exon123,800,159123,800,229710
Exon123,797,081123,797,172922
Exon123,794,391123,794,473831
Exon123,792,675123,792,765912
Exon123,789,438123,789,5521150
Exon123,787,732123,787,8581271
Exon123,785,682123,785,7971160
Exon123,783,787123,783,9721860
Exon123,782,254123,782,4572040
Exon123,779,921123,780,1302100
Exon123,779,640123,779,7891500
Exon123,778,532123,778,6611301
Exon123,777,477123,777,539631
Exon123,776,151123,776,3481981
Exon123,770,686123,770,776912
Exon123,769,182123,769,255741
Exon123,768,197123,768,3361400
Exon123,759,825123,760,0522280
Exon123,758,518123,758,578611
Exon123,753,469123,753,558901
Exon123,751,846123,752,0582131
Exon123,751,324123,751,399762
Exon123,744,933123,745,0921600
Exon123,744,122123,744,217960
Exon123,742,361123,742,5321721
Exon123,738,978123,739,1832060
Exon123,737,057123,737,2091530
Exon123,734,208123,734,270630
Exon123,732,448123,732,529821
Exon123,731,339123,731,396582
Exon123,725,914123,726,0161030
Exon123,725,171123,725,245750
Exon123,724,949123,725,0541061
Exon123,723,760123,723,843841
Exon123,722,526123,722,615901
Exon123,719,563123,719,646841
Exon123,716,008123,716,1461392
Exon123,715,017123,715,1461300
UTR
123,714,614123,715,016