BRIP1 - BRCA1 interacting protein C-terminal helicase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9BX63 HGNC Approved Gene Symbol: BRIP1 
Ensembl ENSG00000136492 
Synonyms : OF, BACH1, FANCJ
HgncId : HGNC:20473  Omim: 605882 
Refseq: NM_032043  GenBank: AF360549 
 
Genomic coordinates: Cytogenetic location: 17q23.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

BRIP1 Gene Structure

Chromosome: chr17
Genbank ID: NM_032043 Orientation: -
Length coding sequence : 3747 nucleotides.
Regionstartendregion lengthphase at end
UTR59,940,64459,940,920
UTR
59,938,90159,938,930
Exon59,938,80859,938,900930
Exon59,937,15759,937,2681121
Exon59,934,41959,934,5921741
Exon59,926,49059,926,6171280
Exon59,924,46259,924,5811200
Exon59,885,82859,886,1182910
Exon59,878,61459,878,8352220
Exon59,876,46159,876,6602002
Exon59,870,95859,871,0901330
Exon59,861,63159,861,7851552
Exon59,858,20159,858,3661660
Exon59,857,62259,857,7621410
Exon59,853,76259,853,9231620
Exon59,821,79359,821,9521601
Exon59,820,37459,820,4951220
Exon59,793,31259,793,4241132
Exon59,770,79159,770,873831
Exon59,763,19759,763,5263301
Exon59,760,65759,761,5018450
UTR
59,756,54759,760,656