BRD1 - bromodomain containing 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 308 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O95696 HGNC Approved Gene Symbol: BRD1 
Ensembl ENSG00000100425 
Synonyms : BRL, BRPF2 Previous Names: "bromodomain-containing 1"
HgncId : HGNC:1102  Omim: 604589 
Refseq: NM_014577  GenBank: AF005067 
 
Genomic coordinates: Cytogenetic location: 22q13.33 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

BRD1 Gene Structure

Chromosome: chr22
Genbank ID: NM_001304809 Orientation: -
Length coding sequence : 3174 nucleotides.
Regionstartendregion lengthphase at end
UTR50,219,37750,219,548
UTR
50,217,96650,217,979
Exon50,216,59950,217,96513672
Exon50,197,85250,198,0081570
Exon50,192,63650,192,7671320
Exon50,192,20650,192,3341290
Exon50,191,45350,191,7653131
Exon50,187,68250,187,9422611
Exon50,181,03850,181,1421051
Exon50,171,32650,171,4611362
Exon50,170,68250,170,8091281
Exon50,169,69850,169,8071100
Exon50,169,23950,169,3931552
Exon50,167,88150,168,0641840
UTR
50,166,92650,167,880