ATL1 - atlastin GTPase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 12 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q8WXF7 HGNC Approved Gene Symbol: ATL1 
Previous Symbols: SPG3, SPG3A Ensembl ENSG00000198513 
Synonyms : FSP1, AD-FSP Previous Names: "spastic paraplegia 3A (autosomal dominant)"
HgncId : HGNC:11231  Omim: 606439 
GenBank: AF131801 
 
Genomic coordinates: Cytogenetic location: 14q22.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ATL1 Gene Structure

Chromosome: chr14
Genbank ID: NM_001127713 Orientation: +
Length coding sequence : 1659 nucleotides.
Regionstartendregion lengthphase at end
UTR51,026,84451,026,983
Exon51,026,98451,027,017341
Exon51,054,54951,054,7962480
Exon51,057,65951,057,7931350
Exon51,058,25351,058,3571050
Exon51,060,56451,060,614510
Exon51,062,29451,062,350570
Exon51,079,97751,080,069930
Exon51,081,09151,081,2291391
Exon51,087,31751,087,4441280
Exon51,088,56151,088,617570
Exon51,089,89551,089,966720
Exon51,094,74951,095,1804320
Exon51,098,94751,099,0571110
UTR51,099,05851,099,784