ARHGEF1 - Rho guanine nucleotide exchange factor 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 7 View list of all current human gene IDs
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Cross References
UniProt: Q92888 HGNC Approved Gene Symbol: ARHGEF1 
Ensembl ENSG00000076928 
Synonyms : P115-RHOGEF, SUB1.5, LBCL2 Previous Names: "Rho guanine nucleotide exchange factor (GEF) 1"
HgncId : HGNC:681  Omim: 601855 
Refseq: NM_199002  GenBank: U64105 
 
Genomic coordinates: Cytogenetic location: 19q13.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ARHGEF1 Gene Structure

Chromosome: chr19
Genbank ID: NM_199002 Orientation: +
Length coding sequence : 2781 nucleotides.
Regionstartendregion lengthphase at end
UTR42,388,44542,388,534
Exon42,388,53542,388,560262
Exon42,392,13542,392,177430
Exon42,392,26342,392,349870
Exon42,392,82342,392,9361140
Exon42,396,09642,396,194990
Exon42,396,40242,396,444431
Exon42,396,67442,396,9202472
Exon42,397,34542,397,374302
Exon42,398,28042,398,3791000
Exon42,398,52442,398,620971
Exon42,398,69942,398,734361
Exon42,399,42242,399,5591381
Exon42,400,45042,400,5551062
Exon42,402,59142,402,7361461
Exon42,406,03742,406,1831471
Exon42,406,42442,406,506830
Exon42,406,68342,406,8081260
Exon42,406,93442,407,0481151
Exon42,407,45742,407,5571010
Exon42,407,85942,407,936780
Exon42,408,18742,408,262761
Exon42,408,36842,408,5351681
Exon42,409,10142,409,188882
Exon42,409,32742,409,413872
Exon42,409,91242,409,979681
Exon42,410,09142,410,177871
Exon42,410,60942,410,7721640
Exon42,410,85542,410,938840
UTR42,410,93942,410,955