APOBEC3A - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P31941  HGNC Approved Gene Symbol: APOBEC3A 
Ensembl ENSG00000128383 
Synonyms : ARP3, PHRBN Previous Names: "apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A"
HgncId : HGNC:17343  Omim: 607109 
Refseq: NM_145699  GenBank: U03891 
 
Genomic coordinates: Cytogenetic location: 22q13.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

APOBEC3A Gene Structure

Chromosome: chr22
Genbank ID: NM_145699 Orientation: +
Length coding sequence : 597 nucleotides.
Regionstartendregion lengthphase at end
UTR39,353,52639,353,696
Exon39,353,69739,353,725292
Exon39,355,54739,355,6911450
Exon39,357,39239,357,6862951
Exon39,358,10339,358,2181160
Exon39,358,50039,358,514150
UTR39,358,51539,359,188