APC - APC, WNT signaling pathway regulator

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 26 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P25054 HGNC Approved Gene Symbol: APC 
Ensembl ENSG00000134982 
Synonyms : DP2, DP3, DP2.5, PPP1R46 Previous Names: "adenomatosis polyposis coli", "adenomatous polyposis coli"
HgncId : HGNC:583  Omim: 611731 
Refseq: NM_000038  GenBank: M74088 
 
Genomic coordinates: Cytogenetic location: 5q22.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

APC Gene Structure

Chromosome: chr5
Genbank ID: NM_000038 Orientation: +
Length coding sequence : 8529 nucleotides.
Regionstartendregion lengthphase at end
UTR112,090,569112,090,587
Exon112,090,588112,090,7221350
Exon112,102,023112,102,107851
Exon112,102,886112,103,0872022
Exon112,111,326112,111,4341090
Exon112,116,487112,116,6001140
Exon112,128,143112,128,226840
Exon112,136,976112,137,0801050
Exon112,151,192112,151,290990
Exon112,154,663112,155,0413791
Exon112,157,593112,157,688961
Exon112,162,805112,162,9441400
Exon112,163,626112,163,703780
Exon112,164,553112,164,6691170
Exon112,170,648112,170,8622152
Exon112,173,250112,179,82365740
UTR112,179,824112,181,936