ALK - ALK receptor tyrosine kinase

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 61 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UM73 HGNC Approved Gene Symbol: ALK 
Ensembl ENSG00000171094 
Synonyms : CD246 Previous Names: "anaplastic lymphoma kinase (Ki-1)", "anaplastic lymphoma receptor tyrosine kinase"
HgncId : HGNC:427  Omim: 105590 
Refseq: NM_004304  GenBank: D45915 
 
Genomic coordinates: Cytogenetic location: 2p23.2-p23.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ALK Gene Structure

Chromosome: chr2
Genbank ID: NM_004304 Orientation: -
Length coding sequence : 4860 nucleotides.
Regionstartendregion lengthphase at end
UTR
30,143,52630,144,477
Exon30,142,85930,143,5256671
Exon29,940,44429,940,5631201
Exon29,917,71629,917,8801651
Exon29,754,78129,754,9822022
Exon29,606,59829,606,7251281
Exon29,551,21629,551,3471321
Exon29,543,61729,543,7481321
Exon29,541,17029,541,2701010
Exon29,519,75429,519,9231702
Exon29,498,26829,498,362951
Exon29,497,96529,498,0931291
Exon29,473,97129,474,1331632
Exon29,462,54629,462,6961510
Exon29,456,43129,456,5621320
Exon29,455,17029,455,3141451
Exon29,451,75029,451,9321831
Exon29,450,44029,450,538991
Exon29,449,78829,449,9401531
Exon29,448,32729,448,4311051
Exon29,446,20829,446,3941872
Exon29,445,38329,445,473910
Exon29,445,21029,445,274652
Exon29,443,57229,443,7011300
Exon29,436,85029,436,947982
Exon29,432,65229,432,744932
Exon29,430,03729,430,1381022
Exon29,420,40829,420,5421352
Exon29,419,63629,419,726910
Exon29,416,09029,416,7886990
UTR
29,415,64029,416,089