AFP - alpha fetoprotein

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P02771 HGNC Approved Gene Symbol: AFP 
Previous Symbols: HPAFP Ensembl ENSG00000081051 
Synonyms : FETA
HgncId : HGNC:317  Omim: 104150 
GenBank: V01514 
 
Genomic coordinates: Cytogenetic location: 4q13.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AFP Gene Structure

Chromosome: chr4
Genbank ID: NM_001134 Orientation: +
Length coding sequence : 1827 nucleotides.
Regionstartendregion lengthphase at end
UTR74,301,93574,301,979
Exon74,301,98074,302,064851
Exon74,302,87774,302,928522
Exon74,303,89174,304,0231330
Exon74,306,31974,306,5302122
Exon74,308,01374,308,1451330
Exon74,309,06474,309,161982
Exon74,310,71074,310,8391300
Exon74,313,17974,313,3932152
Exon74,315,05274,315,1841330
Exon74,315,75374,315,850982
Exon74,316,33274,316,4701390
Exon74,318,11874,318,3412242
Exon74,319,48274,319,6141330
Exon74,320,95374,320,997450
UTR74,320,99874,321,007