ABO - ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for ABO View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P16442 HGNC Approved Gene Symbol: ABO 
Ensembl ENSG00000175164 
Synonyms : A3GALNT, A3GALT1 Previous Names: "ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)"
HgncId : HGNC:79  Omim: 110300 
Refseq: NM_020469  GenBank: AF134415 
 
Genomic coordinates: Cytogenetic location: 9q34.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ABO Gene Structure

Chromosome: chr9
Genbank ID: NM_020469 Orientation: -
Length coding sequence : 1061 nucleotides.
Regionstartendregion lengthphase at end
UTR
136,150,606136,150,630
Exon136,150,578136,150,605281
Exon136,137,502136,137,571702
Exon136,136,721136,136,777572
Exon136,135,223136,135,270482
Exon136,133,487136,133,522362
Exon136,132,796136,132,9291341
Exon136,131,053136,131,7436912
UTR
136,130,563136,131,052