Structural Similarities for the Entities in PDB 6MZE

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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Entity #1 | Chains A,C,H,J,O,Q,V,X

Description: Tubulin alpha-1A chain protein | Length: 451

No structure alignment results are available for 6MZE.A, 6MZE.C, 6MZE.H, 6MZE.J, 6MZE.O, 6MZE.Q, 6MZE.V, 6MZE.X explicitly.

These chains are represented by chain 5IYZ.A which has more than 95% sequence identity.

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Entity #2 | Chains B,D,I,K,P,R,W,Y

Description: Tubulin beta chain protein | Length: 445

No structure alignment results are available for 6MZE.B, 6MZE.D, 6MZE.I, 6MZE.K, 6MZE.P, 6MZE.R, 6MZE.W, 6MZE.Y explicitly.

These chains are represented by chain 5IYZ.A which has more than 40% sequence identity.

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Entity #3 | Chains E,L,S,Z

Description: Protein Stu2p/Alp14p protein | Length: 536

No structure alignment results are available for 6MZE.E, 6MZE.L, 6MZE.S, 6MZE.Z explicitly.

These chains are represented by chain XXXX.null which has more than 90% sequence identity.

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Entity #4 | Chains F,G,M,N,T,U,a,b

Description: Designed ankyrin repeat protein (DARPIN) D1 protein | Length: 169

No structure alignment results are available for 6MZE.F, 6MZE.G, 6MZE.M, 6MZE.N, 6MZE.T, 6MZE.U, 6MZE.a, 6MZE.b explicitly.

These chains are represented by chain 4DUI.A which is 100% sequence identical.

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References