Structural Similarities for the Entities in PDB 6H7W

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains C,J

Description: Vacuolar protein sorting-associated protein 26-like protein protein | Length: 292

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Entity #2 | Chains A,B,E,F,G,H,N,P

Description: Putative vacuolar protein sorting-associated protein protein | Length: 368

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Entity #3 | Chains D,K,L,V

Description: Putative vacuolar protein sorting-associated protein protein | Length: 129

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Entity #4 | Chains M,O

Description: Putative vacuolar protein sorting-associated protein protein | Length: 220

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Entity #5 | Chains S,T

Description: Vacuolar protein sorting-associated protein 29 protein | Length: 193

No structure alignment results are available for 6H7W.S, 6H7W.T explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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View how chain 6H7W.T compares with the representative chain xxxx. Select a comparison method:


Entity #6 | Chains Q,R

Description: Vacuolar protein sorting-associated protein 35 protein | Length: 846

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References