Structural Similarities for the Entities in PDB 6BYH

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,G

Description: S-phase kinase-associated protein 1 protein | Length: 165

No structure alignment results are available for 6BYH.A, 6BYH.B, 6BYH.G explicitly.

These chains are represented by chain XXXX.null which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 6BYH.G compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains E,F,I

Description: Lysine-specific demethylase 2A protein | Length: 47

No structure alignment results are available for 6BYH.E, 6BYH.F, 6BYH.I explicitly.

These chains are represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 6BYH.I compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains C,D,H

Description: Polyubiquitin-B protein | Length: 87

No structure alignment results are available for 6BYH.C, 6BYH.D, 6BYH.H explicitly.

These chains are represented by chain 5TOG.A which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 6BYH.H compares with the representative chain PDP:5TOGAa. Select a comparison method:


References