6ACK

Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-bound conformation 3


Structural Similarities for the Entities in PDB 6ACK

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

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Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,C

Description: Spike glycoprotein protein | Length: 1203

No structure alignment results are available for 6ACK.A, 6ACK.B, 6ACK.C explicitly.

These chains are represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #2 | Chains D

Description: Angiotensin-converting enzyme 2 protein | Length: 603

No structure alignment results are available for 6ACK.D explicitly.

It is represented by chain XXXX.null which has more than 40% sequence identity.

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References