Structural Similarities for the Entities in PDB 5XXT

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,C,E,G,I,K,M,O,Q

Description: Tubulin alpha-1A chain protein | Length: 438

No structure alignment results are available for 5XXT.A, 5XXT.C, 5XXT.E, 5XXT.G, 5XXT.I, 5XXT.K, 5XXT.M, 5XXT.O, 5XXT.Q explicitly.

These chains are represented by chain XXXX.null which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 5XXT.Q compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains B,D,F,H,J,L,N,P,R

Description: Tubulin beta chain protein | Length: 426

No structure alignment results are available for 5XXT.B, 5XXT.D, 5XXT.F, 5XXT.H, 5XXT.J, 5XXT.L, 5XXT.N, 5XXT.P, 5XXT.R explicitly.

These chains are represented by chain XXXX.null which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 5XXT.R compares with the representative chain xxxx. Select a comparison method:


References