Structural Similarities for the Entities in PDB 5IG7

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,D,G,J

Description: 1E01 Fab fragment heavy chain protein | Length: 227

No structure alignment results are available for 5IG7.A, 5IG7.D, 5IG7.G, 5IG7.J explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 5IG7.J compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains B,E,H,K

Description: 1E01 Fab fragment light chain protein | Length: 216

No structure alignment results are available for 5IG7.B, 5IG7.E, 5IG7.H, 5IG7.K explicitly.

These chains are represented by chain 4NZU.L which has more than 50% sequence identity.

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Entity #3 | Chains C,F,I,L

Description: peptide PRO-LEU-GLN-PRO-GLN-GLN-PRO-PHE-PRO protein | Length: 9

This entity is too short to be considered for the all vs. all structure alignments.


References