Structural Similarities for the Entities in PDB 5I44

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,B,D,E,F,G,H,I,J,K

Description: Chromosome-anchoring protein RacA protein | Length: 69

No structure alignment results are available for 5I44.A, 5I44.B, 5I44.D, 5I44.E, 5I44.F, 5I44.G, 5I44.H, 5I44.I, 5I44.J, 5I44.K explicitly.

These chains are represented by chain 5I41.B which is 100% sequence identical.

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View how chain 5I44.K compares with the representative chain PDP:5I41Ba. Select a comparison method:

Entity #2 | Chains P,R,T,U,W,Z

Description: DNA (5'-D(*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*A)-3') dna | Length: 14

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.