Structural Similarities for the Entities in PDB 5FIK

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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Entity #1 | Chains A,B,C

Description: ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein | Length: 510

No structure alignment results are available for 5FIK.A, 5FIK.B, 5FIK.C explicitly.

These chains are represented by chain 2JDI.a which is 100% sequence identical.

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Entity #10 | Chains V

Description: ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL protein | Length: 77

No structure alignment results are available for 5FIK.V explicitly.

It is represented by chain 2CLY.c which is 100% sequence identical.

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Entity #11 | Chains W

Description: ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein | Length: 217

No structure alignment results are available for 5FIK.W explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #2 | Chains D,E,F

Description: ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein | Length: 482

No structure alignment results are available for 5FIK.D, 5FIK.E, 5FIK.F explicitly.

These chains are represented by chain 2JDI.d which is 100% sequence identical.

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Entity #3 | Chains G

Description: ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein | Length: 273

No structure alignment results are available for 5FIK.G explicitly.

It is represented by chain 2JDI.g which is 100% sequence identical.

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Entity #4 | Chains H

Description: ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein | Length: 146

No structure alignment results are available for 5FIK.H explicitly.

It is represented by chain 2JDI.h which is 100% sequence identical.

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Entity #5 | Chains I

Description: ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL protein | Length: 50

No structure alignment results are available for 5FIK.I explicitly.

It is represented by chain 2JDI.I which is 100% sequence identical.

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Entity #6 | Chains J,K,L,M,N,O,P,Q

Description: ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, MITOCHONDRIAL protein | Length: 72

No structure alignment results are available for 5FIK.J, 5FIK.K, 5FIK.L, 5FIK.M, 5FIK.N, 5FIK.O, 5FIK.P, 5FIK.Q explicitly.

These chains are represented by chain 4F4S.A which has more than 50% sequence identity.

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Entity #7 | Chains S

Description: ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL protein | Length: 190

No structure alignment results are available for 5FIK.S explicitly.

It is represented by chain 2WSS.S which is 100% sequence identical.

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Entity #8 | Chains T

Description: ATP SYNTHASE F(0) COMPLEX SUBUNIT B1, MITOCHONDRIAL protein | Length: 174

No structure alignment results are available for 5FIK.T explicitly.

It is represented by chain 5FIJ.T which is 100% sequence identical.

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Entity #9 | Chains U

Description: ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL protein | Length: 124

No structure alignment results are available for 5FIK.U explicitly.

It is represented by chain 2WSS.U which is 100% sequence identical.

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References