Structural Similarities for the Entities in PDB 5BNX

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: Histone H3.3 protein | Length: 79

No structure alignment results are available for 5BNX.A explicitly.

It is represented by chain 2HUE.B which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 5BNX.A compares with the representative chain PDP:2HUEBa. Select a comparison method:


Entity #2 | Chains B

Description: Histone H4 protein | Length: 102

No structure alignment results are available for 5BNX.B explicitly.

It is represented by chain 1TZY.d which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5BNX.B compares with the representative chain d1tzyd_. Select a comparison method:


Entity #3 | Chains C

Description: DNA replication licensing factor MCM2 protein | Length: 70

  Loading...

Entity #4 | Chains D

Description: Histone chaperone ASF1B protein | Length: 158

No structure alignment results are available for 5BNX.D explicitly.

It is represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 5BNX.D compares with the representative chain xxxx. Select a comparison method:


References