Structural Similarities for the Entities in PDB 5ADY

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains 0

Description: 50S RIBOSOMAL PROTEIN L32 protein | Length: 57

No structure alignment results are available for 5ADY.0 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.0 compares with the representative chain xxxx. Select a comparison method:


Entity #10 | Chains B

Description: 23S RRNA rna | Length: 2903

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #11 | Chains C

Description: 50S RIBOSOMAL PROTEIN L2 protein | Length: 273

No structure alignment results are available for 5ADY.C explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.C compares with the representative chain xxxx. Select a comparison method:


Entity #12 | Chains D

Description: 50S RIBOSOMAL PROTEIN L3 protein | Length: 209

No structure alignment results are available for 5ADY.D explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.D compares with the representative chain xxxx. Select a comparison method:


Entity #13 | Chains E

Description: 50S RIBOSOMAL PROTEIN L4 protein | Length: 201

No structure alignment results are available for 5ADY.E explicitly.

It is represented by chain 1DMG.a which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.E compares with the representative chain d1dmga_. Select a comparison method:


Entity #14 | Chains F

Description: 50S RIBOSOMAL PROTEIN L5 protein | Length: 179

No structure alignment results are available for 5ADY.F explicitly.

It is represented by chain 1IQ4.a which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.F compares with the representative chain d1iq4a_. Select a comparison method:


Entity #15 | Chains G

Description: 50S RIBOSOMAL PROTEIN L6 protein | Length: 177

No structure alignment results are available for 5ADY.G explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.G compares with the representative chain xxxx. Select a comparison method:


Entity #16 | Chains H

Description: 50S RIBOSOMAL PROTEIN L9 protein | Length: 149

No structure alignment results are available for 5ADY.H explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.H compares with the representative chain xxxx. Select a comparison method:


Entity #17 | Chains I

Description: 50S RIBOSOMAL PROTEIN L11 protein | Length: 142

No structure alignment results are available for 5ADY.I explicitly.

It is represented by chain 3EGV.b which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.I compares with the representative chain d3egvb1. Select a comparison method:


Entity #18 | Chains J

Description: 50S RIBOSOMAL PROTEIN L13 protein | Length: 142

No structure alignment results are available for 5ADY.J explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.J compares with the representative chain xxxx. Select a comparison method:


Entity #19 | Chains K

Description: 50S RIBOSOMAL PROTEIN L14 protein | Length: 123

No structure alignment results are available for 5ADY.K explicitly.

It is represented by chain 1WHI.a which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.K compares with the representative chain d1whia_. Select a comparison method:


Entity #2 | Chains 1

Description: 50S RIBOSOMAL PROTEIN L33 protein | Length: 55

No structure alignment results are available for 5ADY.1 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.1 compares with the representative chain xxxx. Select a comparison method:


Entity #20 | Chains L

Description: 50S RIBOSOMAL PROTEIN L15 protein | Length: 144

No structure alignment results are available for 5ADY.L explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.L compares with the representative chain xxxx. Select a comparison method:


Entity #21 | Chains M

Description: 50S RIBOSOMAL PROTEIN L16 protein | Length: 136

No structure alignment results are available for 5ADY.M explicitly.

It is represented by chain XXXX.null which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.M compares with the representative chain xxxx. Select a comparison method:


Entity #22 | Chains N

Description: 50S RIBOSOMAL PROTEIN L17 protein | Length: 127

No structure alignment results are available for 5ADY.N explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.N compares with the representative chain xxxx. Select a comparison method:


Entity #23 | Chains O

Description: 50S RIBOSOMAL PROTEIN L18 protein | Length: 117

No structure alignment results are available for 5ADY.O explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.O compares with the representative chain xxxx. Select a comparison method:


Entity #24 | Chains P

Description: 50S RIBOSOMAL PROTEIN L19 protein | Length: 115

No structure alignment results are available for 5ADY.P explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.P compares with the representative chain xxxx. Select a comparison method:


Entity #25 | Chains Q

Description: 50S RIBOSOMAL PROTEIN L20 protein | Length: 118

No structure alignment results are available for 5ADY.Q explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.Q compares with the representative chain xxxx. Select a comparison method:


Entity #26 | Chains R

Description: 50S RIBOSOMAL PROTEIN L21 protein | Length: 103

No structure alignment results are available for 5ADY.R explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.R compares with the representative chain xxxx. Select a comparison method:


Entity #27 | Chains S

Description: 50S RIBOSOMAL PROTEIN L22 protein | Length: 110

No structure alignment results are available for 5ADY.S explicitly.

It is represented by chain 1I4J.a which has more than 30% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.S compares with the representative chain d1i4ja_. Select a comparison method:


Entity #28 | Chains T

Description: 50S RIBOSOMAL PROTEIN L23 protein | Length: 100

No structure alignment results are available for 5ADY.T explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.T compares with the representative chain xxxx. Select a comparison method:


Entity #29 | Chains U

Description: 50S RIBOSOMAL PROTEIN L24 protein | Length: 104

No structure alignment results are available for 5ADY.U explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.U compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains 2

Description: 50S RIBOSOMAL PROTEIN L34 protein | Length: 46

No structure alignment results are available for 5ADY.2 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.2 compares with the representative chain xxxx. Select a comparison method:


Entity #30 | Chains V

Description: 50S RIBOSOMAL PROTEIN L25 protein | Length: 94

No structure alignment results are available for 5ADY.V explicitly.

It is represented by chain 1DFU.p which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.V compares with the representative chain d1dfup_. Select a comparison method:


Entity #31 | Chains W

Description: 50S RIBOSOMAL PROTEIN L27 protein | Length: 85

No structure alignment results are available for 5ADY.W explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.W compares with the representative chain xxxx. Select a comparison method:


Entity #32 | Chains X

Description: 50S RIBOSOMAL PROTEIN L28 protein | Length: 78

No structure alignment results are available for 5ADY.X explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.X compares with the representative chain xxxx. Select a comparison method:


Entity #33 | Chains Y

Description: 50S RIBOSOMAL PROTEIN L29 protein | Length: 63

No structure alignment results are available for 5ADY.Y explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.Y compares with the representative chain xxxx. Select a comparison method:


Entity #34 | Chains Z

Description: 50S RIBOSOMAL PROTEIN L30 protein | Length: 59

No structure alignment results are available for 5ADY.Z explicitly.

It is represented by chain 1BXY.a which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.Z compares with the representative chain d1bxya_. Select a comparison method:


Entity #4 | Chains 3

Description: 50S RIBOSOMAL PROTEIN L35 protein | Length: 65

No structure alignment results are available for 5ADY.3 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.3 compares with the representative chain xxxx. Select a comparison method:


Entity #5 | Chains 4

Description: 50S RIBOSOMAL PROTEIN L36 protein | Length: 38

No structure alignment results are available for 5ADY.4 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.4 compares with the representative chain xxxx. Select a comparison method:


Entity #6 | Chains 5

Description: 50S RIBOSOMAL PROTEIN L1 protein | Length: 234

No structure alignment results are available for 5ADY.5 explicitly.

It is represented by chain 4REO.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 5ADY.5 compares with the representative chain PDP:4REOAa. Select a comparison method:


Entity #7 | Chains 6

Description: GTPASE HFLX protein | Length: 426

No structure alignment results are available for 5ADY.6 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.6 compares with the representative chain xxxx. Select a comparison method:


Entity #8 | Chains 7

Description: 50S RIBOSOMAL PROTEIN L10 protein | Length: 165

No structure alignment results are available for 5ADY.7 explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 5ADY.7 compares with the representative chain xxxx. Select a comparison method:


Entity #9 | Chains A

Description: 5S RRNA rna | Length: 120

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


References